BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031D07SP1|AL429388
(905 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1689 0.0
>3x_Contig1786
Length = 33838
Score = 1689 bits (843), Expect = 0.0
Identities = 887/905 (98%), Gaps = 4/905 (0%)
Strand = Plus / Minus
Query: 2 ggttcgttagtgactgggttgttcaccatgcagatatgctcatcgttctggttgtgggaa 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16001 ggttcgttagtgactgggttgttcaccatgcagatatgctcatcgttctggttgtgggaa 15942
Query: 62 tgatgaatgtgtgtgtktgtatttgaggatccatacgaacggtcgacgcttagtagggca 121
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15941 tgatgaatgtgtgtgtgtgtatttgaggatccatacgaacggtcgacgcttagtagggca 15882
Query: 122 tccacagatttaccacgttgatgattacctctatttctagtcatggtacgagaccctgtc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15881 tccacagatttaccacgttgatgattacctctatttctagtcatggtacgagaccctgtc 15822
Query: 182 gtgttcgttgattttggatccagtttattatcactgacctcatgcgattyccgagtattt 241
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 15821 gtgttcgttgattttggatccagtttattatcactgacctcatgcgatttccgagtattt 15762
Query: 242 atggtgagaagttgtctttgtttgthagaattctgttgagawawaaccatacttggtttt 301
||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||||
Sbjct: 15761 atggtgagaagttgtctttgtttgttagaattctgttgagatataaccatacttggtttt 15702
Query: 302 cttctgggactcaccagagcaggttcgtataaaggatcctcatcgtcctcgctgaacata 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15701 cttctgggactcaccagagcaggttcgtataaaggatcctcatcgtcctcgctgaacata 15642
Query: 362 gcgtcaccctcatcatcaccttcttcctcttcttcttctaawttyhcattttcttcgagt 421
||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 15641 gcgtcaccctcatcatcaccttcttcctcttcttcttctaatttttcattttcttcgagt 15582
Query: 422 acagaactcttgattgactctatgcgaggaacagttacctgcgataaawccctctgttgg 481
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 15581 acagaactcttgattgactctatgcgaggaacagttacctgcgataaatccctctgttgg 15522
Query: 482 ttttcgttcaatcgttgttgggtatccatgtataacgactcctcattcgatttggtagaa 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15521 ttttcgttcaatcgttgttgggtatccatgtataacgactcctcattcgatttggtagaa 15462
Query: 542 acctcctcactgtcagagaaatcgtcctgtaagtcattcagaatcttgtctgtcaawwct 601
||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 15461 acctcctcactgtcagagaaatcgtcctgtaagtcattcagaatcttgtctgttaattct 15402
Query: 602 gtgttgttttttcctccgtctgcattttcctcatactccctctcctcctcctcttcttct 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15401 gtgttgttttttcctccgtctgcattttcctcatactccctctcctcctcctcttcttct 15342
Query: 662 tcttcttcttcatccgaaagatcatcatcgaagttgaattcttggtcaaaacgagacagg 721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15341 tcttcttcttcatccgaaagatcatcatcgaagttgaattcttggtcaaaacgagacagg 15282
Query: 722 gtatcctgatcatttgtccaataataccccgccatgttttggtcat-ccataacgtagcc 780
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 15281 gtatcctgatcatttgtccaataataccccgccatgttttggtcatcccataacgtagcc 15222
Query: 781 tgagcgggtcaatttctcatcctcttcgtacatgttattg-aawyaccataaccctcatt 839
||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 15221 tgagc-ggtcaatttctcatcctcttcgtacatgttattgaaatcaccataaccctcatt 15163
Query: 840 caaaaactcatcttcgaatccgttttcgttgttaattctcgtttggaag-taaacccacg 898
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 15162 caaaaactcatcttcgaatccgttttcgttgttaattctcgtttggaagttaaacccacg 15103
Query: 899 gacgc 903
|||||
Sbjct: 15102 gacgc 15098
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8902
Number of Sequences: 1807
Number of extensions: 8902
Number of successful extensions: 687
Number of sequences better than 1.0e-20: 1
length of query: 905
length of database: 10,358,551
effective HSP length: 16
effective length of query: 889
effective length of database: 10,329,639
effective search space: 9183049071
effective search space used: 9183049071
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)